Information for 11-GCCAGATGGC (Motif 19)

A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C
Reverse Opposite:
A C T G A T G C G T A C G T C A A G C T A G T C A C G T A C T G A C T G A T G C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.768
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif123.6
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets51.7 +/- 23.3bp
Average Position of motif in Background50.9 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCCAGATGGC
AACAGATGGC
 A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GCCAGATGGC----
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCCAGATGGC---
-CAAGATGGCGGC
 A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GCCAGATGGC--
CCGCCCAAGGGCAG
 A C G T A C G T A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C A C G T A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCCAGATGGC
AACAKATGGY
 A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCCAGATGGC
VNAVCAGCTGGC
 A C G T A C G T A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCAGATGGC
AACAGATGGT
 A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCCAGATGGC---
-CAAGATGGCGGC
 A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C A C G T A C G T A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NEUROD2/MA0668.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCAGATGGC
ACCATATGGC
 A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCAGATGGC
NNVVCAGCTGBN
 A C G T A C G T A T C G T G A C G T A C C G T A T C A G C T G A A C G T A C T G T A C G A G T C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T