Information for 8-GCCYSKMGCCMAT (Motif 16)

A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C T A G A G T C A C T G G T A C A T C G C T A G A T C G A T C G A G T C
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 21.7bp
Average Position of motif in Background32.4 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GCCYSKMGCCMAT---
------AGCCAATCGG
 A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCYSKMGCCMAT
TGGCACCATGCCAA-
 A C G T A C G T A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCYSKMGCCMAT--
---ACTAGCCAATCA
 A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCCYSKMGCCMAT
----CGTGCCAAG
 A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GCCYSKMGCCMAT
------TGCCAA-
 A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCYSKMGCCMAT---
AGCTCGGCGCCAAAAGC
 A C G T A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCCYSKMGCCMAT
CTTGGCANNNTGCCAA-
 A C G T A C G T A C G T A C G T A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCYSKMGCCMAT
TGCCCCCGGGCA--
 A C G T A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCYSKMGCCMAT---
CCTTCGGCGCCAAAAGG
 A C G T A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCYSKMGCCMAT---
-AAATGGACCAATCAG
 A C T G A T G C A T G C A G T C T A G C A C T G G T A C A C T G A G T C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G