Information for 4-GTCCTCATGGCCATCT (Motif 5)

C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
Reverse Opposite:
T C G A A T C G C T G A A C G T C A T G A C T G A G T C A G T C C G T A C G A T A C T G C G T A A C T G C T A G C G T A G T A C
p-value:1e-12
log p-value:-2.975e+01
Information Content per bp:1.715
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 27.7bp
Average Position of motif in Background57.6 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCCTCATGGCCATCT
---NTCAAGGTCA---
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GTCCTCATGGCCATCT
-----CAAGGHCANV-
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCCTCATGGCCATCT
---BTCAAGGTCA---
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCCTCATGGCCATCT
GTTGCCATGGCAAC--
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCCTCATGGCCATCT
AAGTTCAAGGTCAGC-
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCCTCATGGCCATCT
NGTTGCCATGGCAA---
 A C G T C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCCTCATGGCCATCT
AAGCACATGG------
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTCCTCATGGCCATCT
----TCAAGGTCATA-
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCCTCATGGCCATCT
GTTGCCATGGCAACM-
 C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCCTCATGGCCATCT
GGTTGCCATGGCAA---
 A C G T C A T G C G A T A G T C A G T C A C G T A G T C C G T A G A C T A C T G A C T G T G A C G A T C C G T A G A C T T A G C A G C T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T A C G T