Information for 21-AGTGTCAKAT (Motif 34)

C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T T G A C A C G T A C T G C T G A A G T C C T G A A G T C C G A T
p-value:1e-5
log p-value:-1.261e+01
Information Content per bp:1.832
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif62.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets46.5 +/- 31.1bp
Average Position of motif in Background48.8 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AGTGTCAKAT
--TGTCANYT
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGTGTCAKAT
-NTGTCAN--
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTGTCAKAT
VBTGWCAGCB
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGTCAKAT--
TNNNNGGTGTCATNTNT
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTGTCAKAT-
AGGTGHCAGACA
 A C G T C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTGTCAKAT
RHTGWCAR--
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGTGTCAKAT
---GTCATN-
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTGTCAKAT
CCTGTCAA--
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTGTCAKAT-------
AAGGCCAGATGGTCCGG
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGTGTCAKAT-
-ATGCCAGACN
 C G T A C T A G A G C T A C T G A G C T A G T C C G T A A C T G C G T A A C G T A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C