Information for 14-AGACATGCACAGC (Motif 25)

C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C G T C T A G A G T C G T C A A C G T A C T G A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.929e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 32.7bp
Average Position of motif in Background48.5 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGACATGCACAGC
--CCAGGAACAG-
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGACATGCACAGC
CCAGACRSVB-----
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AGACATGCACAGC
-------CACAGN
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AGACATGCACAGC
CAAATCCAGACATCACA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGACATGCACAGC
AGCAACAGCCGCACC
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGACATGCACAGC--
--ATATGCAAATNNN
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGACATGCACAGC
CCAGACAG-------
 A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGACATGCACAGC------
----GAGCACAGCAGGACA
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGACATGCACAGC
--ATATGCAAAT-
 C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGACATGCACAGC-
AAAATACATGTAATACT
 A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C G T C A G T A C C G T A C T A G A G T C A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T