Information for 9-TGGGAGACAGWGTCAG (Motif 13)

C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
Reverse Opposite:
A G T C G A C T C A T G T C G A G T A C C G A T A T G C C G A T T A C G A C G T A G T C G C A T A G T C A G T C A T G C G C T A
p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.711
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets54.8 +/- 22.6bp
Average Position of motif in Background55.0 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGGGAGACAGWGTCAG
AGGTGNCAGACAG------
 A C G T A C G T A C G T C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAGACAGWGTCAG
NTGATTGACAGN-----
 A C G T C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGGGAGACAGWGTCAG
AGGTGHCAGACA-------
 A C G T A C G T A C G T C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGGGAGACAGWGTCAG
GTAGGTCACTGGGTCA-
 A C G T C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGGAGACAGWGTCAG
TGAGTGACAGSC----
 C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAGACAGWGTCAG
BTGABTGACAGS-----
 A C G T C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:TGGGAGACAGWGTCAG--
--------TGAGTCAGCA
 C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.48
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGAGACAGWGTCAG--
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TGGGAGACAGWGTCAG
---TTGACAGG-----
 C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TGGGAGACAGWGTCAG
--GRTGMTRGAGCC--
 C G A T T A C G C T A G T C A G C G T A A C T G G T C A A G T C C G T A A T C G G C T A C A T G A G C T G T A C C T G A A C T G
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T