p-value: | 1e-5 |
log p-value: | -1.187e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 14.2 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 29.8 +/- 21.0bp |
Average Position of motif in Background | 39.3 +/- 25.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAGGGATTTT -NGGGATTA- |
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NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AAGGGATTTT-- --GGGAATTTCC |
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PH0126.1_Obox6/Jaspar
Match Rank: | 3 |
Score: | 0.65 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGGGATTTT-- AAAAACGGATTATTG |
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Gfi1/MA0038.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGGGATTTT CNGTGATTTN |
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PH0138.1_Pitx2/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGGATTTT----- TGAAGGGATTAATCATC |
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PH0130.1_Otx2/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGGATTTT----- TGTAGGGATTAATTGTC |
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PH0129.1_Otx1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AAGGGATTTT----- AGAGGGGATTAATTTAT |
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RELA/MA0107.1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAGGGATTTT-- --GGGAATTTCC |
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MF0003.1_REL_class/Jaspar
Match Rank: | 9 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAGGGATTTT-- --GGGGATTTCC |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 10 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGGGATTTT---- TTAGAGGGATTAACAAT |
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