Information for 8-AAATATTTTA (Motif 16)

C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A
Reverse Opposite:
G C A T C G T A G C T A G T C A G C T A C G A T C T G A A G C T G C A T G C A T
p-value:1e-7
log p-value:-1.736e+01
Information Content per bp:1.546
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif9.61%
Number of Background Sequences with motif2408.9
Percentage of Background Sequences with motif5.05%
Average Position of motif in Targets40.7 +/- 29.9bp
Average Position of motif in Background48.6 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAATATTTTA---
CTAATATTGCTAAA
 A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AAATATTTTA---
CTAATATTGCTAAA
 A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAATATTTTA
-AATAATT--
 C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAATATTTTA-------
NTNAATTTTATTGNATT
 C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAATATTTTA--
TTAATGTTTAACC
 A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PH0146.1_Pou3f1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAATATTTTA---
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAATATTTTA--
ATGAATAATTAATG
 A C G T A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

PH0149.1_Pou3f4/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAATATTTTA---
AATTAATTAATTAATTC
 A C G T A C G T A C G T A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0028.1_En1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAATATTTTA---
GCGAACTAATTAATGC
 A C G T A C G T A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAATATTTTA-
TTAATNATTAAC
 A C G T C G T A C G T A T C G A G A C T G C T A C G A T C A G T C A G T G C A T C G T A A C G T
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C