p-value: | 1e-9 |
log p-value: | -2.142e+01 |
Information Content per bp: | 1.940 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.58% |
Number of Background Sequences with motif | 2.6 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 40.6 +/- 33.2bp |
Average Position of motif in Background | 71.1 +/- 35.1bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TTTAAAACTTGTT TTTGAAACCG--- |
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GRHL1/MA0647.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTTAAAACTTGTT-- ---AAAACCGGTTTT |
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LIN54/MA0619.1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTTAAAACTTGTT NATTCAAAT------ |
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PB0175.1_Sox4_2/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTTAAAACTTGTT----- -GGAAAAATTGTTAGGAA |
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TFCP2/MA0145.3/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTTAAAACTTGTT- ----AAACCGGTTT |
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PB0165.1_Sox11_2/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TTTAAAACTTGTT----- ----AAAATTGTTATGAA |
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MYF6/MA0667.1/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTTAAAACTTGTT ---AACAGCTGTT |
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Nr2e3/MA0164.1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TTTAAAACTTGTT ----AAGCTTG-- |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TTTAAAACTTGTT----- --AANTTATTGTTCTNNA |
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PH0040.1_Hmbox1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTTAAAACTTGTT------ --GAAAACTAGTTAACATC |
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