Information for 14-GCTAATGGATGGG (Motif 12)

C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.870e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 27.6bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCTAATGGATGGG-----
-GTATTGGGTGGGTAATT
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCTAATGGATGGG
-CTAATCGNT---
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTAATGGATGGG
-CTAATKGV----
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T A C G T

PH0109.1_Nkx1-1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTAATGGATGGG-
TGCGCTAATTAGTGGGA
 A C G T A C G T A C G T C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G A C G T
C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTAATGGATGGG
GTTAATGGCC---
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTAATGGATGGG
-NTAATKGTTT--
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTAATGGATGGG
-NTAATTGN----
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTAATGGATGGG
GKTAATGR-----
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTAATGGATGGG
GCTAATTGCT---
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTAATGGATGGG
-ATGATKGATGRC
 C T A G A G T C C G A T C G T A C G T A C G A T A C T G A C T G C G T A C G A T C T A G A C T G A C T G
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C