Information for 4-THCATAGAAACAA (Motif 8)

A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A
Reverse Opposite:
C G A T A C G T A C T G A C G T C G A T A C G T A T G C A C G T C T G A C G A T A C T G C A G T C G T A
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.845
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif22.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets43.4 +/- 29.5bp
Average Position of motif in Background48.3 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:THCATAGAAACAA--
----AATAAACAATN
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:THCATAGAAACAA
-SCCTAGCAACAG
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:THCATAGAAACAA-
-----GTAAACAAT
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:THCATAGAAACAA
-WWATRTAAACAN
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A
A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:THCATAGAAACAA---
------RNAACAATGG
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:forward strand
Alignment:THCATAGAAACAA
-----GTAAACAA
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:THCATAGAAACAA-
--------AACAAT
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--THCATAGAAACAA
NTTTCTNAGAAA---
 A C G T A C G T A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:THCATAGAAACAA----
TAAATGTAAACAAAGGT
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:THCATAGAAACAA-
-------NAACAAT
 A C G T G C T A G T A C C G T A A G C T C G T A A T C G C G T A C G T A C G T A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T