Information for 12-TAAAAGGGTTKTG (Motif 20)

C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
Reverse Opposite:
G T A C C G T A G T A C C G T A C T G A G A T C A G T C G A T C C G A T A C G T A C G T G C A T C G T A
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.701
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.92%
Number of Background Sequences with motif326.3
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets52.0 +/- 25.1bp
Average Position of motif in Background50.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0088.1_Isl2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAAAAGGGTTKTG
AAATTAATTGATTTNG
 A C G T A C G T A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAAAAGGGTTKTG
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAAAAGGGTTKTG
NAAACCGGTTTT-
 C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAAAAGGGTTKTG
GNNTTAATTGGTTGTT
 A C G T A C G T A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

PH0108.1_Msx3/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TAAAAGGGTTKTG
NNNTTAATTGGTTTTN
 A C G T A C G T A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAAAAGGGTTKTG
CCTTAATNGNTTTT-
 A C G T A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAAAAGGGTTKTG
GNCTATAAAAGG------
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAAAAGGGTTKTG-
AAAAACGGATTATTG
 A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TAAAAGGGTTKTG---
TGAACCGGATTAATGAA
 A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TAAAAGGGTTKTG---
TGAACCGGATTAATGAA
 A C G T C G A T C G T A G T C A T C G A C G T A C T A G C T A G C T A G G A C T A C G T C A T G C G A T A C T G A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A