Information for 11-AAMTGGCCCAGAT (Motif 19)

C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T
Reverse Opposite:
C T G A C G A T A T G C A C G T C A T G C A T G C A T G A G T C A T G C G C T A A C T G C G A T G A C T
p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.704
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif94.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.3 +/- 19.8bp
Average Position of motif in Background47.5 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAMTGGCCCAGAT
---TGACCTARTT
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAMTGGCCCAGAT-------
---AAGGCCAGATGGTCCGG
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAMTGGCCCAGAT---
--TTGACCTANTTATN
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AAMTGGCCCAGAT---
------TCCAGATGTT
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAMTGGCCCAGAT-
----TGCCCAGNHW
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZBTB18/MA0698.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAMTGGCCCAGAT----
----CATCCAGATGTTC
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAMTGGCCCAGAT-
GGGRAARRGRMCAGMTG
 A C G T A C G T A C G T C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AAMTGGCCCAGAT---
------AACAGATGGT
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAMTGGCCCAGAT
---TGACCTTGAT
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.54
Offset:9
Orientation:forward strand
Alignment:AAMTGGCCCAGAT----
---------AGATAASR
 C G T A C G T A T G A C C A G T A T C G T A C G G A T C G A T C G A T C C G T A A T C G C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A