Information for 2-AGTTGCAAASWCC (Motif 5)

C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C
Reverse Opposite:
A C T G C T A G C G A T A T C G A G C T A C G T A C G T A T C G A G T C C G T A C G T A A G T C A C G T
p-value:1e-11
log p-value:-2.694e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 25.6bp
Average Position of motif in Background64.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGTTGCAAASWCC-
----GGAAATTCCC
 C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGTTGCAAASWCC
NATGTTGCAA-----
 A C G T A C G T C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGTTGCAAASWCC-
----GGAAANCCCC
 C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTTGCAAASWCC
CGGTTTCAAA----
 A C G T C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGTTGCAAASWCC-
----GGAAATTCCC
 C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTTGCAAASWCC-
CAATTGCAAAAATAT
 A C G T C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGTTGCAAASWCC-
----GGAAATCCCC
 C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGTTGCAAASWCC-
AGAGTCCAAAGTCCA
 A C G T C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGTTGCAAASWCC-----
--GGCAAAAGTCCAATAA
 C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTTGCAAASWCC-
CANAGNNCAAAGTCCA
 A C G T A C G T C G T A A C T G A C G T C G A T A C T G A T G C C G T A C G T A C T G A A T C G C G A T A G T C A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A