Information for 10-MAGCAGYAGMAGM (Motif 20)

G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C
Reverse Opposite:
A C T G G T A C A C G T A C T G A G T C A C G T C T A G A G T C A C G T C T A G G T A C A C G T A C T G
p-value:1e-3
log p-value:-9.096e+00
Information Content per bp:1.872
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets71.0 +/- 13.4bp
Average Position of motif in Background52.0 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MAGCAGYAGMAGM-
ADGGYAGYAGCATCT
 A C G T G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---MAGCAGYAGMAGM-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--MAGCAGYAGMAGM-
ATTTACAGTAGCAAAA
 A C G T A C G T G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:MAGCAGYAGMAGM
-ANCAGCTG----
 G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:MAGCAGYAGMAGM
-AGCAGCTGCTNN
 G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MAGCAGYAGMAGM
-GACAGCTGCAG-
 G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:MAGCAGYAGMAGM
CAGCAGCTGN---
 G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--MAGCAGYAGMAGM-
ATGTACAGTAGCAAAG
 A C G T A C G T G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MAGCAGYAGMAGM
-AACAGCTGCAG-
 G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:MAGCAGYAGMAGM
-AGCAGCTGCT--
 G T A C C G T A A C T G A G T C C G T A A C T G A G T C C G T A C T A G G T A C C G T A A C T G G T A C
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T