Information for 5-AGAGAAGAMAAAGAAM (Motif 14)

G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C
Reverse Opposite:
A C T G G C A T A G C T G A T C G C A T G A C T C G A T A C T G G A C T A G T C G C A T C G A T G A T C G A C T G A T C C G A T
p-value:1e-9
log p-value:-2.090e+01
Information Content per bp:1.490
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 23.5bp
Average Position of motif in Background64.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAGAAGAMAAAGAAM-
-AAACAGACAAAGGAAT
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGAGAAGAMAAAGAAM
AAGATAAGATAACA---
 A C G T G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAGAAGAMAAAGAAM
AAATAAGAAAAAAC--
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGAGAAGAMAAAGAAM
CAAAAGTAAACAAAG---
 A C G T A C G T G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGAGAAGAMAAAGAAM
----AAAACAAAGG--
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAGAAGAMAAAGAAM--
-AGAAGAACAAAGGACTA
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGAAGAMAAAGAAM
AGATAAGA--------
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGAGAAGAMAAAGAAM--
-ATAAGAACAAAGGACTA
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGAGAAGAMAAAGAAM
----AAAACAATGG--
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAGAAGAMAAAGAAM--
-GTTAAAAAAAAAAATTA
 G C T A C T A G C T G A C T A G G C T A C G T A T C A G C T G A G T A C G C T A C T G A C G T A C T A G T C G A C G T A T G A C A C G T A C G T
A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T