Information for 4-ATCTGTGGCATKAAAT (Motif 11)

T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T
Reverse Opposite:
C G T A A G C T G A C T C A G T G T A C G C T A A C G T A C T G G T A C A G T C G C T A T A G C C G T A A C T G G C T A A C G T
p-value:1e-9
log p-value:-2.148e+01
Information Content per bp:1.684
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif80.2
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.7 +/- 18.3bp
Average Position of motif in Background48.0 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0046.1_Hoxa10/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT---
---TAGGTAATAAAATTCA
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.58
Offset:9
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT
---------ATTAAA-
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT
------GCAATAAAAA
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT
------GTCATAAAAN
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0056.1_Hoxa9/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT----
---ACGGCCATAAAATTAAT
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT---
--TAGAGGGATTAAATTTC
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T A C G T A C G T A C G T
A C G T A C G T G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT---
---AGAGCCATAAAATTCG
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT
----AAGCCATAAAA-
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T
A C G T A C G T A C G T A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ATCTGTGGCATKAAAT
------NACAGGAAAT
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATCTGTGGCATKAAAT
-----GGTAATAAAAA
 T C G A C A G T T G A C A C G T A T C G C A G T C T A G A C T G G T A C C G T A C G A T C A T G G C T A C G T A C T G A C G A T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A