Information for 5-ATAAACTACTGAA (Motif 8)

C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
Reverse Opposite:
C A G T A C G T G T A C T C G A A C T G C A G T C G T A A C T G A C G T A C G T C G A T C G T A A C G T
p-value:1e-11
log p-value:-2.666e+01
Information Content per bp:1.804
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif36.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.8 +/- 23.8bp
Average Position of motif in Background48.6 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATAAACTACTGAA
AATAAACAATN---
 A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATAAACTACTGAA---
ACATGCTACCTAATAC
 C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

CDX1/MA0878.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATAAACTACTGAA
GCAATAAAA-------
 A C G T A C G T A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATAAACTACTGAA
WWATRTAAACAN-----
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATAAACTACTGAA--
CNTTAAGTACTTAANG
 A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A A C G T A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATAAACTACTGAA
NGYCATAAAWCH-----
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATAAACTACTGAA
GTAAACAA-----
 C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATAAACTACTGAA
GTAAACAA-----
 C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATAAACTACTGAA
GTCATAAAAN------
 A C G T A C G T A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------ATAAACTACTGAA
AAAGGTAATAAAATTT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A G T C A C G T A A G T C A C G T G C T A A G T C A G C T C A T G C G T A G T C A
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T A C G T A C G T A C G T