Information for 8-ATAGCACCTA (Motif 23)

C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
Reverse Opposite:
A C G T C T G A A C T G A C T G A C G T A C T G A G T C A C G T C G T A A G C T
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.936
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.5 +/- 11.9bp
Average Position of motif in Background82.7 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATAGCACCTA
-TGACACCT-
 C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATAGCACCTA
-TCACACCT-
 C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATAGCACCTA
-TCACACCT-
 C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATAGCACCTA
ATTAACACCT-
 A C G T C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATAGCACCTA
-TCACACCT-
 C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATAGCACCTA
TTMACACCTT
 C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATAGCACCTA
TTTCACACCTN
 A C G T C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATAGCACCTA
-TCACACCT-
 C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATAGCACCTA-
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATAGCACCTA
KTTCACACCT-
 A C G T C T G A A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G C T C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T