Information for 5-HTTBCAGAACTGTHTG (Motif 13)

G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C T G A G T A C C G T A A C T G A C G T A C G T A G T C A C G T A C T G T A G C G T C A C G T A C A G T
p-value:1e-10
log p-value:-2.321e+01
Information Content per bp:1.782
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 11.8bp
Average Position of motif in Background51.9 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:HTTBCAGAACTGTHTG---
----VAGRACAKNCTGTBC
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:HTTBCAGAACTGTHTG---
----VAGRACAKWCTGTYC
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:HTTBCAGAACTGTHTG---
----AAGAACATWHTGTTC
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:HTTBCAGAACTGTHTG----
----NAGAACAGNCTGTNCT
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:HTTBCAGAACTGTHTG----
----NAGNACANNNTGTNCT
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:HTTBCAGAACTGTHTG
ATTGCACAATA-----
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:HTTBCAGAACTGTHTG
-TTCTAGAABNTTCTA
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G
A C G T G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-HTTBCAGAACTGTHTG
NNNNTGAGCACTGTNNG
 A C G T G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:HTTBCAGAACTGTHTG
ATGCCAGACN------
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:HTTBCAGAACTGTHTG
-TTCTAGAACGTTC--
 G C T A A C G T C A G T A C T G G T A C C G T A A C T G G T C A C G T A A G T C C G A T A C T G A G C T G A C T A C G T A C T G
A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T A C G T