Information for 1-AADGTAAACA (Motif 1)

C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A
Reverse Opposite:
G A C T C T A G A C G T A C G T A C G T C T G A G A T C G A T C C G A T C G A T
p-value:1e-14
log p-value:-3.371e+01
Information Content per bp:1.646
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif575.6
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets48.2 +/- 25.3bp
Average Position of motif in Background48.2 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AADGTAAACA
AAAGTAAACA
 C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.91
Offset:0
Orientation:forward strand
Alignment:AADGTAAACA
AAAGTAAACA
 C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-AADGTAAACA----
CAAAGTAAACANNNN
 A C G T C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AADGTAAACA--
TAAGTAAACAAA
 C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AADGTAAACA--
WWTRTAAACAVG
 C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A A C G T A C G T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxk1/MA0852.1/Jaspar

Match Rank:6
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AADGTAAACA-----
AAAATGTAAACAAACAG
 A C G T A C G T C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--AADGTAAACA-----
AAAATGTAAACAAACAG
 A C G T A C G T C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--AADGTAAACA
NCTAAGTAAACA
 A C G T A C G T C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--AADGTAAACA---
NCWRWGTAAACANSV
 A C G T A C G T C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--AADGTAAACA--
CAAACGTAAACAAT
 A C G T A C G T C G T A G C T A C T A G C T A G G A C T G T C A C G T A T G C A G A T C C T G A A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T