Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-18 | -4.282e+01 | 0.0000 | 33.0 | 5.60% | 344.7 | 0.71% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-16 | -3.880e+01 | 0.0000 | 122.0 | 20.71% | 4469.2 | 9.15% | motif file (matrix) |
svg |
3 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-16 | -3.818e+01 | 0.0000 | 33.0 | 5.60% | 404.9 | 0.83% | motif file (matrix) |
svg |
4 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-15 | -3.634e+01 | 0.0000 | 24.0 | 4.07% | 200.1 | 0.41% | motif file (matrix) |
svg |
5 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-15 | -3.586e+01 | 0.0000 | 114.0 | 19.35% | 4190.9 | 8.58% | motif file (matrix) |
svg |
6 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-15 | -3.483e+01 | 0.0000 | 91.0 | 15.45% | 2987.7 | 6.12% | motif file (matrix) |
svg |
7 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-14 | -3.290e+01 | 0.0000 | 130.0 | 22.07% | 5322.2 | 10.90% | motif file (matrix) |
svg |
8 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-12 | -2.768e+01 | 0.0000 | 78.0 | 13.24% | 2671.4 | 5.47% | motif file (matrix) |
svg |
9 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-11 | -2.730e+01 | 0.0000 | 48.0 | 8.15% | 1207.8 | 2.47% | motif file (matrix) |
svg |
10 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-10 | -2.404e+01 | 0.0000 | 112.0 | 19.02% | 4894.1 | 10.02% | motif file (matrix) |
svg |
11 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-10 | -2.391e+01 | 0.0000 | 31.0 | 5.26% | 607.8 | 1.24% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-8 | -1.940e+01 | 0.0000 | 86.0 | 14.60% | 3675.0 | 7.53% | motif file (matrix) |
svg |
13 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-8 | -1.871e+01 | 0.0000 | 76.0 | 12.90% | 3129.9 | 6.41% | motif file (matrix) |
svg |
14 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-7 | -1.650e+01 | 0.0000 | 93.0 | 15.79% | 4365.8 | 8.94% | motif file (matrix) |
svg |
15 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-6 | -1.602e+01 | 0.0000 | 16.0 | 2.72% | 249.8 | 0.51% | motif file (matrix) |
svg |
16 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-6 | -1.524e+01 | 0.0000 | 88.0 | 14.94% | 4168.5 | 8.54% | motif file (matrix) |
svg |
17 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-6 | -1.405e+01 | 0.0000 | 44.0 | 7.47% | 1619.1 | 3.32% | motif file (matrix) |
svg |
18 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-5 | -1.351e+01 | 0.0000 | 53.0 | 9.00% | 2167.0 | 4.44% | motif file (matrix) |
svg |
19 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-5 | -1.296e+01 | 0.0000 | 86.0 | 14.60% | 4275.5 | 8.76% | motif file (matrix) |
svg |
20 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-4 | -1.055e+01 | 0.0005 | 101.0 | 17.15% | 5588.7 | 11.45% | motif file (matrix) |
svg |
21 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -1.023e+01 | 0.0006 | 25.0 | 4.24% | 825.3 | 1.69% | motif file (matrix) |
svg |
22 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-4 | -9.282e+00 | 0.0015 | 124.0 | 21.05% | 7422.1 | 15.20% | motif file (matrix) |
svg |
23 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-3 | -8.675e+00 | 0.0027 | 33.0 | 5.60% | 1365.8 | 2.80% | motif file (matrix) |
svg |
24 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.992e+00 | 0.0051 | 58.0 | 9.85% | 3004.9 | 6.15% | motif file (matrix) |
svg |
25 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.566e+00 | 0.0075 | 8.0 | 1.36% | 148.2 | 0.30% | motif file (matrix) |
svg |
26 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-2 | -6.785e+00 | 0.0158 | 57.0 | 9.68% | 3093.7 | 6.34% | motif file (matrix) |
svg |
27 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.682e+00 | 0.0169 | 27.0 | 4.58% | 1169.7 | 2.40% | motif file (matrix) |
svg |
28 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-2 | -6.193e+00 | 0.0266 | 46.0 | 7.81% | 2431.8 | 4.98% | motif file (matrix) |
svg |
29 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -6.010e+00 | 0.0308 | 29.0 | 4.92% | 1352.0 | 2.77% | motif file (matrix) |
svg |
30 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -5.495e+00 | 0.0498 | 24.0 | 4.07% | 1090.1 | 2.23% | motif file (matrix) |
svg |
31 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.486e+00 | 0.0498 | 30.0 | 5.09% | 1467.6 | 3.01% | motif file (matrix) |
svg |
32 |
| TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer | 1e-2 | -5.144e+00 | 0.0664 | 5.0 | 0.85% | 93.1 | 0.19% | motif file (matrix) |
svg |
33 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.107e+00 | 0.0668 | 4.0 | 0.68% | 59.4 | 0.12% | motif file (matrix) |
svg |
34 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -5.061e+00 | 0.0679 | 33.0 | 5.60% | 1710.7 | 3.50% | motif file (matrix) |
svg |
35 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-2 | -5.030e+00 | 0.0680 | 62.0 | 10.53% | 3717.4 | 7.61% | motif file (matrix) |
svg |
36 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.793e+00 | 0.0838 | 10.0 | 1.70% | 334.7 | 0.69% | motif file (matrix) |
svg |
37 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -4.714e+00 | 0.0883 | 13.0 | 2.21% | 501.5 | 1.03% | motif file (matrix) |
svg |