Information for 4-AGCTTGTGAAACTTAA (Motif 8)

C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
Reverse Opposite:
A C G T C G A T C G T A C G T A A C T G A C G T A C G T A C G T G T A C C T G A A G T C G T C A C G T A A C T G G T A C C G A T
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 25.9bp
Average Position of motif in Background65.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGCTTGTGAAACTTAA
----ACTGAAACCA--
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGCTTGTGAAACTTAA
-GCTCGTAAAAA----
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGCTTGTGAAACTTAA---
-------GWAAYHTGAKMC
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGCTTGTGAAACTTAA
-NATTGTGCAAT----
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCTTGTGAAACTTAA
AAAGCTCGTAAAATTT--
 A C G T A C G T C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCTTGTGAAACTTAA
AAACCTCGTAAAATTT--
 A C G T A C G T C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:AGCTTGTGAAACTTAA---
-------GAAACTGAAACT
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AGCTTGTGAAACTTAA---
-------GAAAGTGAAAGT
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCTTGTGAAACTTAA
--CSTGGGAAAD----
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGCTTGTGAAACTTAA
----TTTGAAACCG--
 C G T A A C T G A G T C C G A T C A G T A C T G A G C T A C T G C G T A C G T A C G T A A G T C C G A T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T