Information for 15-AATATAAGGCTGC (Motif 21)

G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
Reverse Opposite:
C A T G G A T C G C T A T A C G G T A C G A T C C G A T A C G T C T G A A G C T G C T A A C G T C G A T
p-value:1e-6
log p-value:-1.468e+01
Information Content per bp:1.682
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif96.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets45.8 +/- 22.9bp
Average Position of motif in Background51.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATATAAGGCTGC
CTACCAATAAAATTCT--
 A C G T A C G T A C G T A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AATATAAGGCTGC
-AGATAAGA----
 G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AATATAAGGCTGC
TAGGTAATAAAATTCA--
 A C G T A C G T A C G T A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATATAAGGCTGC
CCAATAAAAA-----
 A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AATATAAGGCTGC
AACCCAATAAAATTCG--
 A C G T A C G T A C G T A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATATAAGGCTGC
CCAATAAAAA-----
 A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AATATAAGGCTGC
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AATATAAGGCTGC
NANTATTATAATTNNN-
 A C G T A C G T A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A A C G T

Gata4/MA0482.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AATATAAGGCTGC
NNGAGATAAGA----
 A C G T A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATATAAGGCTGC
NVAGATAAGR----
 A C G T G C T A G T C A C G A T C T G A A G C T C G T A C G T A C T A G C A T G A G T C C A G T C A T G G T A C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T