Information for 5-TGTAATATAAACT (Motif 5)

A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T
Reverse Opposite:
C G T A A T C G A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T C G T A A G T C C G T A
p-value:1e-11
log p-value:-2.719e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.8 +/- 15.6bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTAATATAAACT-
CCGTATTATAAACAA
 A C G T A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGTAATATAAACT-
--WWATRTAAACAN
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTAATATAAACT-----
-TAAATGTAAACAAAGGT
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGTAATATAAACT--
---WWTRTAAACAVG
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGTAATATAAACT
-GAAAMTGAAACT
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T
A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGTAATATAAACT
GGTAATAAAAA--
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGTAATATAAACT
-GAAACTGAAACT
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTAATATAAACT
-GTCATAAAAN--
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTAATATAAACT
-GWAAYHTGAKMC
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TGTAATATAAACT---
-----AATAAACAATN
 A C G T A C T G A C G T C G T A C G T A C G A T G T C A A C G T G T C A C G T A C G T A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A