Information for 2-TTAAACAAATATT (Motif 3)

G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
Reverse Opposite:
G T C A C G T A C G A T G T C A C G A T C G A T A C G T T C A G G A C T G A C T A G C T G T C A C G T A
p-value:1e-12
log p-value:-2.959e+01
Information Content per bp:1.750
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.92%
Number of Background Sequences with motif236.7
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets42.4 +/- 27.9bp
Average Position of motif in Background49.9 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TTAAACAAATATT-
--AAACAAACATTC
 G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T A C G T
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTAAACAAATATT
AAAGTAAACAAAAATT
 A C G T A C G T A C G T G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTAAACAAATATT
-TATGTAAATAT-
 G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TTAAACAAATATT
-WAAGTAAAYA--
 G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TTAAACAAATATT
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TTAAACAAATATT------
-----CTAATATTGCTAAA
 G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TTAAACAAATATT------
-----CTAATATTGCTAAA
 G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTAAACAAATATT
AAAAAGTAAACAAACAC-
 A C G T A C G T A C G T A C G T A C G T G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTAAACAAATATT
AAAAAGTAAACAAACAC-
 A C G T A C G T A C G T A C G T A C G T G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTAAACAAATATT
-TAATCAATTA--
 G C A T C A G T C T G A C T G A C T G A A G T C C G T A C G T A G C T A C A G T C G T A G A C T A C G T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T