Information for 11-AAAGGGTAAAACA (Motif 23)

C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T A C G T A C G T C T G A A T G C A G T C A G T C A C G T A C G T A G C T
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.2 +/- 18.0bp
Average Position of motif in Background57.5 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAGGGTAAAACA-----
-AACACCAAAACAAAGGA
 C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAGGGTAAAACA-----
--ATATCAAAACAAAACA
 C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAGGGTAAAACA
--AGGGTAACAGC
 C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGGTAAAACA
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGTAAAACA---
GATAGGGTATCACTAAT
 A C G T C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGTAAAACA---
GATAGGGTATCACTAAT
 A C G T C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AAAGGGTAAAACA------
-----GCAAAACATTACTA
 C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGTAAAACA---
AATAGGGTATCATATAT
 A C G T C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PB0186.1_Tcf3_2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AAAGGGTAAAACA----
--AGCCGAAAAAAAAAT
 C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGTAAAACA
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T C T G A C G T A C G T A A C T G A C T G A T C G A G C T C G T A C G T A G T C A C G T A A G T C C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T