Information for 10-AGCTGCCAGAAACTGT (Motif 18)

C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A T C G C G A T A C G T A C G T G T A C A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.110e+01
Information Content per bp:1.910
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 24.5bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myb/MA0100.2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCTGCCAGAAACTGT
CCAACTGCCA--------
 A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGCTGCCAGAAACTGT
CCAACTGCCA--------
 A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGCTGCCAGAAACTGT
CGACCAACTGCCATGC-----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCCAGAAACTGT
NNNCAGCTGTCAATATN---
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCTGCCAGAAACTGT
--CTGCCCGCA-----
 C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCCAGAAACTGT
AACGAGCTGTCAATAC----
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCCAGAAACTGT
AACTAGCTGTCAATAC----
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCTGCCAGAAACTGT
--TTGCCAAG------
 C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCTGCCAGAAACTGT
AGGTGNCAGACAG---
 C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCCAGAAACTGT
AAAGACCTGTCAATAC----
 A C G T A C G T A C G T A C G T C G T A C T A G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A T G C A C G T A C T G A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T A C G T A C G T