Information for 2-GGAAMAGCAA (Motif 11)

A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A
Reverse Opposite:
A C G T G A C T T A C G A G T C A C G T A C T G A C G T A C G T A G T C A G T C
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.822
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif6.42%
Number of Background Sequences with motif800.4
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets50.1 +/- 23.8bp
Average Position of motif in Background49.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGAAMAGCAA
TGGAACAGMA-
 A C G T A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGAAMAGCAA
CCAGGAACAG---
 A C G T A C G T A C G T A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGAAMAGCAA
TGGAAAA----
 A C G T A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GGAAMAGCAA
NNTGGAAANN---
 A C G T A C G T A C G T A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGAAMAGCAA--
GRAASTGAAAST
 A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAAMAGCAA-
CGGAAGTGAAAC
 A C G T A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAAMAGCAA
AATGGAAAAT---
 A C G T A C G T A C G T A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAAMAGCAA--
GGAAGTGAAAST
 A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAAMAGCAA--
--AACAGGAAGT
 A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A A C G T A C G T
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGAAMAGCAA
NATGGAAAAN---
 A C G T A C G T A C G T A C T G A C T G T G C A C G T A G T A C C G T A A C T G A T G C C T G A C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T