Information for 4-AAAGTACACA (Motif 9)

G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A
Reverse Opposite:
G A C T A T C G G C A T A T C G A C G T T G C A A G T C A G C T A C G T C G A T
p-value:1e-13
log p-value:-3.115e+01
Information Content per bp:1.609
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.81%
Number of Background Sequences with motif256.5
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets48.9 +/- 25.5bp
Average Position of motif in Background50.4 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAAGTACACA--
SSAATCCACANN
 G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAGTACACA
TCCAATCCACA
 A C G T G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAGTACACA---
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAAGTACACA----
TACTAAGTACTTAAATG
 A C G T A C G T A C G T G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGTACACA
AAAGTAAACA
 G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAGTACACA-
-AAGCACTTAA
 G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAGTACACA
AAAGTAAACA
 G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PH0116.1_Nkx2-9/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAGTACACA----
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

FOXA1/MA0148.3/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTACACA----
CAAAGTAAACANNNN
 A C G T G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAGTACACA--
-AAGTAAACAAA
 G C T A T G C A T C G A T C A G A C G T T G C A A T G C C G T A A T G C C T G A A C G T A C G T
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A