Information for 6-TGAAAAATGAATGGAT (Motif 15)

C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T
Reverse Opposite:
G T C A C G A T A G T C A G T C C G T A C A G T A C G T G T A C C G T A A C G T A C G T A G C T A C G T A C G T A G T C C G T A
p-value:1e-9
log p-value:-2.229e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 26.8bp
Average Position of motif in Background28.5 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TGAAAAATGAATGGAT---
---ACTATGAATGAATGAT
 C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Hoxd8/MA0910.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAAAAATGAATGGAT-
TAAATAATTAATGGCTA
 C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

PH0080.1_Hoxd8/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAAAAATGAATGGAT-
TAAATAATTAATGGCTA
 C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T A C G T
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGAAAAATGAATGGAT
ATGAATAATTAATG---
 A C G T C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAAAAATGAATGGAT
ATGCATAATTAATGAG-
 A C G T C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAAAAATGAATGGAT
ATGCATAATTAATGAG-
 A C G T C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAAAAATGAATGGAT
-AAAAAATCAATAAT-
 C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T
A C G T T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAAAAATGAATGGAT
ATGAATWATTCATGA--
 A C G T C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAAAAATGAATGGAT
TGAATTATGCAT----
 C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGAAAAATGAATGGAT-
-NNNTATTGAATTGNNN
 C G A T C T A G C G T A C G T A C T G A C G T A C G T A A C G T C A T G C G T A G C T A A C G T C T A G A C T G C G T A A C G T A C G T
A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T