Information for 8-GAACGTACTG (Motif 12)

A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G A G C T C G T A A G T C C T A G A C G T A C G T G T A C
p-value:1e-10
log p-value:-2.514e+01
Information Content per bp:1.872
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 17.5bp
Average Position of motif in Background54.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAACGTACTG---
VAGRACAKNCTGTBC
 A C G T A C G T A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAACGTACTG
BGCACGTA---
 A C G T A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAACGTACTG---
VAGRACAKWCTGTYC
 A C G T A C G T A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAACGTACTG---
AAGAACATWHTGTTC
 A C G T A C G T A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G A C G T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAACGTACTG
GCACGTAY--
 A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAACGTACTG---
GAANNTTCTAGAA
 A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G A C G T A C G T A C G T
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HSF1/MA0486.2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAACGTACTG---
GAACGTTCTAGAA
 A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G A C G T A C G T A C G T
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

GMEB2/MA0862.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAACGTACTG
TTACGTAA--
 A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAACGTACTG
NTGGAATGTG---
 A C G T A C G T A C G T A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAACGTACTG
NTGGAATGTN---
 A C G T A C G T A C G T A C T G C G T A C G T A G A T C A C T G C G A T C T G A A G T C A C G T A C T G
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T