Information for 5-TTCACACTTGGCA (Motif 11)

C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A
Reverse Opposite:
C G A T T A C G A T G C G A T C G T C A G T C A T C A G C G A T C T A G C G A T C A T G T G C A G C T A
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.662
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif139.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets44.3 +/- 24.5bp
Average Position of motif in Background50.0 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:TTCACACTTGGCA--
-----NNTTGGCANN
 C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TTCACACTTGGCA-
------CTTGGCAA
 C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TTCACACTTGGCA--
------NTTGGCANN
 C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACTTGGCA
TTTCACACCT----
 A C G T C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.64
Offset:7
Orientation:forward strand
Alignment:TTCACACTTGGCA
-------TTGGCA
 C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACTTGGCA
KTTCACACCT----
 A C G T C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTCACACTTGGCA
---WDNCTGGGCA
 C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTCACACTTGGCA
ATTAACACCT----
 A C G T C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTCACACTTGGCA
TTCACACCTT---
 C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTCACACTTGGCA-
-----GGTTGGCAT
 C G A T A C G T G T A C G C T A G A T C G C T A A G T C A C G T A C G T C T A G T A C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T