Information for 5-TGTACCTTGA (Motif 8)

A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A
Reverse Opposite:
G C A T T A G C C G T A C T G A C T A G A C T G C A G T C G T A G T A C C G T A
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.753
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif859.1
Percentage of Background Sequences with motif1.82%
Average Position of motif in Targets44.6 +/- 26.7bp
Average Position of motif in Background49.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGTACCTTGA------
TGGACTTTGNNCTNTG
 A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGTACCTTGA-----
TGGACTTTGNNCTCN
 A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGTACCTTGA
CTGACCTTTG-
 A C G T A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGTACCTTGA----
ATTGGACTTTGACCCC
 A C G T A C G T A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TGTACCTTGA--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TGTACCTTGA--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGTACCTTGA
CTGTTCCTGG-
 A C G T A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGTACCTTGA--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTACCTTGA----
TGACCTTTGACCCC
 A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTACCTTGA----
TGACCTTTGACCCC
 A C G T A C T G C G A T G T C A A G T C A G T C G A C T A C G T A T C G C G T A A C G T A C G T A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C