Information for 2-AATBCAAABACDTGCT (Motif 2)

C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
Reverse Opposite:
C G T A C T A G A G T C C G T A G A C T A C T G A G C T T C G A A C G T A C G T A C G T A C T G T A G C C G T A A C G T A G C T
p-value:1e-18
log p-value:-4.359e+01
Information Content per bp:1.786
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.7 +/- 31.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATBCAAABACDTGCT
ATATGCAAATNNN----
 A C G T C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATBCAAABACDTGCT
NATTCAAAT-------
 C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATBCAAABACDTGCT
TTATGCAAAT-------
 A C G T C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AATBCAAABACDTGCT
ATATGCAAAT-------
 A C G T C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AATBCAAABACDTGCT
TATGCAAAT-------
 C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATBCAAABACDTGCT
TATGCWAATBAV----
 C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATBCAAABACDTGCT
YATGCATATRCATRT-
 C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATBCAAABACDTGCT
WATGCAAATGAG----
 C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATBCAAABACDTGCT
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AATBCAAABACDTGCT
TTGTATGCAAATTAGA---
 A C G T A C G T A C G T C T G A C G T A A C G T A C T G A G T C C G T A C G T A C G T A A C G T C T G A A G T C C G T A A C G T C T A G A G T C C G A T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A A C G T A C G T A C G T