Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-79 | -1.838e+02 | 0.0000 | 222.0 | 30.75% | 3312.1 | 7.02% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-74 | -1.725e+02 | 0.0000 | 237.0 | 32.83% | 4032.7 | 8.55% | motif file (matrix) |
svg |
3 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-74 | -1.705e+02 | 0.0000 | 96.0 | 13.30% | 461.8 | 0.98% | motif file (matrix) |
svg |
4 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-73 | -1.702e+02 | 0.0000 | 99.0 | 13.71% | 506.1 | 1.07% | motif file (matrix) |
svg |
5 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-72 | -1.677e+02 | 0.0000 | 212.0 | 29.36% | 3287.3 | 6.97% | motif file (matrix) |
svg |
6 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-69 | -1.599e+02 | 0.0000 | 74.0 | 10.25% | 235.4 | 0.50% | motif file (matrix) |
svg |
7 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-64 | -1.478e+02 | 0.0000 | 177.0 | 24.52% | 2550.3 | 5.41% | motif file (matrix) |
svg |
8 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-61 | -1.420e+02 | 0.0000 | 95.0 | 13.16% | 618.9 | 1.31% | motif file (matrix) |
svg |
9 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-60 | -1.382e+02 | 0.0000 | 257.0 | 35.60% | 5640.0 | 11.96% | motif file (matrix) |
svg |
10 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-54 | -1.260e+02 | 0.0000 | 172.0 | 23.82% | 2803.1 | 5.94% | motif file (matrix) |
svg |
11 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-42 | -9.879e+01 | 0.0000 | 92.0 | 12.74% | 961.0 | 2.04% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-36 | -8.370e+01 | 0.0000 | 142.0 | 19.67% | 2744.9 | 5.82% | motif file (matrix) |
svg |
13 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-30 | -6.944e+01 | 0.0000 | 137.0 | 18.98% | 2957.4 | 6.27% | motif file (matrix) |
svg |
14 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-27 | -6.404e+01 | 0.0000 | 123.0 | 17.04% | 2592.2 | 5.50% | motif file (matrix) |
svg |
15 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-26 | -6.035e+01 | 0.0000 | 143.0 | 19.81% | 3492.2 | 7.40% | motif file (matrix) |
svg |
16 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-24 | -5.559e+01 | 0.0000 | 33.0 | 4.57% | 176.1 | 0.37% | motif file (matrix) |
svg |
17 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-21 | -4.876e+01 | 0.0000 | 123.0 | 17.04% | 3102.5 | 6.58% | motif file (matrix) |
svg |
18 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-18 | -4.202e+01 | 0.0000 | 87.0 | 12.05% | 1919.5 | 4.07% | motif file (matrix) |
svg |
19 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-17 | -4.001e+01 | 0.0000 | 250.0 | 34.63% | 9783.0 | 20.74% | motif file (matrix) |
svg |
20 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-17 | -3.937e+01 | 0.0000 | 72.0 | 9.97% | 1451.6 | 3.08% | motif file (matrix) |
svg |
21 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-15 | -3.641e+01 | 0.0000 | 110.0 | 15.24% | 3064.8 | 6.50% | motif file (matrix) |
svg |
22 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-13 | -3.135e+01 | 0.0000 | 91.0 | 12.60% | 2476.8 | 5.25% | motif file (matrix) |
svg |
23 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-12 | -2.931e+01 | 0.0000 | 155.0 | 21.47% | 5585.0 | 11.84% | motif file (matrix) |
svg |
24 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-12 | -2.882e+01 | 0.0000 | 46.0 | 6.37% | 839.3 | 1.78% | motif file (matrix) |
svg |
25 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-12 | -2.778e+01 | 0.0000 | 76.0 | 10.53% | 2001.5 | 4.24% | motif file (matrix) |
svg |
26 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-10 | -2.439e+01 | 0.0000 | 120.0 | 16.62% | 4186.0 | 8.88% | motif file (matrix) |
svg |
27 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-10 | -2.394e+01 | 0.0000 | 17.0 | 2.35% | 129.5 | 0.27% | motif file (matrix) |
svg |
28 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-7 | -1.615e+01 | 0.0000 | 18.0 | 2.49% | 247.6 | 0.53% | motif file (matrix) |
svg |
29 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-6 | -1.580e+01 | 0.0000 | 57.0 | 7.89% | 1751.7 | 3.71% | motif file (matrix) |
svg |
30 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.437e+01 | 0.0000 | 28.0 | 3.88% | 615.8 | 1.31% | motif file (matrix) |
svg |
31 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-6 | -1.418e+01 | 0.0000 | 67.0 | 9.28% | 2313.4 | 4.91% | motif file (matrix) |
svg |
32 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-5 | -1.354e+01 | 0.0000 | 25.0 | 3.46% | 532.6 | 1.13% | motif file (matrix) |
svg |
33 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -1.075e+01 | 0.0002 | 27.0 | 3.74% | 708.4 | 1.50% | motif file (matrix) |
svg |
34 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-4 | -1.063e+01 | 0.0003 | 52.0 | 7.20% | 1839.8 | 3.90% | motif file (matrix) |
svg |
35 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.040e+01 | 0.0003 | 92.0 | 12.74% | 3908.5 | 8.29% | motif file (matrix) |
svg |
36 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-4 | -1.036e+01 | 0.0003 | 47.0 | 6.51% | 1619.5 | 3.43% | motif file (matrix) |
svg |
37 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-4 | -1.016e+01 | 0.0004 | 69.0 | 9.56% | 2725.4 | 5.78% | motif file (matrix) |
svg |
38 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-4 | -9.794e+00 | 0.0005 | 40.0 | 5.54% | 1327.3 | 2.81% | motif file (matrix) |
svg |
39 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-3 | -9.184e+00 | 0.0010 | 43.0 | 5.96% | 1509.0 | 3.20% | motif file (matrix) |
svg |
40 |
| Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer | 1e-3 | -8.690e+00 | 0.0015 | 30.0 | 4.16% | 936.6 | 1.99% | motif file (matrix) |
svg |
41 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-3 | -8.666e+00 | 0.0015 | 61.0 | 8.45% | 2450.6 | 5.20% | motif file (matrix) |
svg |
42 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-3 | -8.450e+00 | 0.0019 | 57.0 | 7.89% | 2264.3 | 4.80% | motif file (matrix) |
svg |
43 |
| Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.447e+00 | 0.0019 | 15.0 | 2.08% | 327.4 | 0.69% | motif file (matrix) |
svg |
44 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-3 | -8.377e+00 | 0.0019 | 39.0 | 5.40% | 1374.4 | 2.91% | motif file (matrix) |
svg |
45 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -8.287e+00 | 0.0020 | 45.0 | 6.23% | 1673.6 | 3.55% | motif file (matrix) |
svg |
46 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -7.802e+00 | 0.0032 | 42.0 | 5.82% | 1563.6 | 3.32% | motif file (matrix) |
svg |
47 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.761e+00 | 0.0033 | 21.0 | 2.91% | 591.2 | 1.25% | motif file (matrix) |
svg |
48 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-3 | -7.599e+00 | 0.0038 | 43.0 | 5.96% | 1629.7 | 3.46% | motif file (matrix) |
svg |
49 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-3 | -7.495e+00 | 0.0041 | 18.0 | 2.49% | 478.4 | 1.01% | motif file (matrix) |
svg |
50 |
| ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer | 1e-3 | -7.280e+00 | 0.0050 | 14.0 | 1.94% | 328.9 | 0.70% | motif file (matrix) |
svg |
51 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.087e+00 | 0.0060 | 30.0 | 4.16% | 1034.6 | 2.19% | motif file (matrix) |
svg |
52 |
| ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.796e+00 | 0.0078 | 42.0 | 5.82% | 1647.4 | 3.49% | motif file (matrix) |
svg |
53 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.495e+00 | 0.0104 | 63.0 | 8.73% | 2785.7 | 5.91% | motif file (matrix) |
svg |
54 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-2 | -6.474e+00 | 0.0104 | 89.0 | 12.33% | 4231.9 | 8.97% | motif file (matrix) |
svg |
55 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -6.257e+00 | 0.0127 | 66.0 | 9.14% | 2978.2 | 6.31% | motif file (matrix) |
svg |
56 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.237e+00 | 0.0127 | 33.0 | 4.57% | 1242.2 | 2.63% | motif file (matrix) |
svg |
57 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -6.161e+00 | 0.0135 | 113.0 | 15.65% | 5660.7 | 12.00% | motif file (matrix) |
svg |
58 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.038e+00 | 0.0150 | 37.0 | 5.12% | 1460.1 | 3.10% | motif file (matrix) |
svg |
59 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.030e+00 | 0.0150 | 47.0 | 6.51% | 1980.3 | 4.20% | motif file (matrix) |
svg |
60 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-2 | -5.994e+00 | 0.0151 | 28.0 | 3.88% | 1015.2 | 2.15% | motif file (matrix) |
svg |
61 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.940e+00 | 0.0157 | 43.0 | 5.96% | 1779.1 | 3.77% | motif file (matrix) |
svg |
62 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-2 | -5.938e+00 | 0.0157 | 29.0 | 4.02% | 1068.3 | 2.27% | motif file (matrix) |
svg |
63 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.862e+00 | 0.0164 | 45.0 | 6.23% | 1892.7 | 4.01% | motif file (matrix) |
svg |
64 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-2 | -5.823e+00 | 0.0168 | 47.0 | 6.51% | 2002.6 | 4.25% | motif file (matrix) |
svg |
65 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-2 | -5.653e+00 | 0.0196 | 40.0 | 5.54% | 1651.2 | 3.50% | motif file (matrix) |
svg |
66 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.579e+00 | 0.0208 | 117.0 | 16.20% | 6000.6 | 12.72% | motif file (matrix) |
svg |
67 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.554e+00 | 0.0210 | 59.0 | 8.17% | 2683.1 | 5.69% | motif file (matrix) |
svg |
68 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -5.543e+00 | 0.0210 | 64.0 | 8.86% | 2961.8 | 6.28% | motif file (matrix) |
svg |
69 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.477e+00 | 0.0221 | 64.0 | 8.86% | 2970.1 | 6.30% | motif file (matrix) |
svg |
70 |
| TATA-Box(TBP)/Promoter/Homer | 1e-2 | -5.399e+00 | 0.0235 | 71.0 | 9.83% | 3373.6 | 7.15% | motif file (matrix) |
svg |
71 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.270e+00 | 0.0264 | 32.0 | 4.43% | 1274.5 | 2.70% | motif file (matrix) |
svg |
72 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.121e+00 | 0.0302 | 24.0 | 3.32% | 885.8 | 1.88% | motif file (matrix) |
svg |
73 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.031e+00 | 0.0326 | 46.0 | 6.37% | 2038.6 | 4.32% | motif file (matrix) |
svg |
74 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-2 | -4.994e+00 | 0.0334 | 60.0 | 8.31% | 2814.0 | 5.97% | motif file (matrix) |
svg |
75 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -4.939e+00 | 0.0348 | 27.0 | 3.74% | 1049.9 | 2.23% | motif file (matrix) |
svg |
76 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -4.919e+00 | 0.0350 | 31.0 | 4.29% | 1255.8 | 2.66% | motif file (matrix) |
svg |
77 |
| ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer | 1e-2 | -4.770e+00 | 0.0401 | 79.0 | 10.94% | 3930.0 | 8.33% | motif file (matrix) |
svg |
78 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-2 | -4.702e+00 | 0.0424 | 16.0 | 2.22% | 531.6 | 1.13% | motif file (matrix) |
svg |
79 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -4.673e+00 | 0.0431 | 20.0 | 2.77% | 723.4 | 1.53% | motif file (matrix) |
svg |
80 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-2 | -4.663e+00 | 0.0431 | 41.0 | 5.68% | 1812.0 | 3.84% | motif file (matrix) |
svg |