Information for 9-CTTGTAAATA (Motif 9)

T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A
Reverse Opposite:
C A G T C T G A C G A T A C G T C G A T C T G A A G T C C G T A C G T A A C T G
p-value:1e-13
log p-value:-3.041e+01
Information Content per bp:1.828
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif228.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets50.2 +/- 25.4bp
Average Position of motif in Background53.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTTGTAAATA
GCTCGTAAAAA
 A C G T T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTTGTAAATA-
TATGTAAATAT
 T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTTGTAAATA--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

FOXI1/MA0042.2/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTTGTAAATA
---GTAAACA
 T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A
A C G T A C G T A C G T T C A G G C A T T G C A G T C A C G T A G A T C T C G A

FOXD2/MA0847.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CTTGTAAATA
---GTAAACA
 T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A

FOXO4/MA0848.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTTGTAAATA
---GTAAACA
 T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A
A C G T A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:7
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTTGTAAATA
--DGTAAACA
 T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A
A C G T A C G T C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTTGTAAATA--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTTGTAAATA---
-ATGTAAACADGS
 T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A A C G T A C G T A C G T
A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTTGTAAATA---
-NDGTAAACARRN
 T G A C A C G T A C G T A C T G G A C T G C T A G T C A C G T A G A C T G T C A A C G T A C G T A C G T
A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A