Information for 4-CACAYTGRTATTT (Motif 7)

A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T G T C A A G T C A G T C C G T A C T A G A C G T T A C G A C G T A C T G
p-value:1e-15
log p-value:-3.533e+01
Information Content per bp:1.909
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.1 +/- 24.7bp
Average Position of motif in Background64.7 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACAYTGRTATTT--
AACAATGNTATTGTT
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACAYTGRTATTT-----
-NNNCTGATATCTCNNNN
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CACAYTGRTATTT--
AACACTGAAATTGTT
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACAYTGRTATTT--
NCNTTTGTTATTTNN
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CACAYTGRTATTT-----
------KCTATTTTTRGH
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

SOX4/MA0867.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACAYTGRTATTT---
AACACTGCAATTGTTC
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CACAYTGRTATTT-------
-----TTCTATTTTTAGNNN
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

SOX21/MA0866.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CACAYTGRTATTT--
AACACTACCATTGTT
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G A T C G C T A G T A C A G C T C T G A G T A C G T A C G T C A A G C T A G C T T A C G A G C T G A C T

Tcf7/MA0769.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CACAYTGRTATTT
-CCTTTGATCTTT
 A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T
A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CACAYTGRTATTT
AACCCTTTGATCTTT
 A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G A T A C T G C T A G A C G T C G T A A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T