Information for 3-KRAAKGTCAATAA (Motif 6)

C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
Reverse Opposite:
A G C T A C G T C T G A A C G T A C G T A T C G C T G A A G T C G T A C A C G T C G A T A G T C G T C A
p-value:1e-16
log p-value:-3.806e+01
Information Content per bp:1.776
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.7 +/- 24.9bp
Average Position of motif in Background52.9 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---KRAAKGTCAATAA
ANGNAAAGGTCA----
 A C G T A C G T A C G T C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:KRAAKGTCAATAA
TCAAGGTCAT---
 C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:KRAAKGTCAATAA
TCAAGGTCAN---
 C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:forward strand
Alignment:KRAAKGTCAATAA
--AAGGTCAC---
 C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---KRAAKGTCAATAA
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---KRAAKGTCAATAA
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:forward strand
Alignment:KRAAKGTCAATAA
--TATGTAAATAT
 C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:KRAAKGTCAATAA
-AAAAGTCAA---
 C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:forward strand
Alignment:KRAAKGTCAATAA
--TATGTAAATAT
 C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:KRAAKGTCAATAA
TCAAGGTCATA--
 C A G T C T A G C G T A C G T A C A T G A C T G A G C T A T G C C G T A T G C A A G C T C G T A C T G A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T