Information for 21-CTTRAYMWAGATA (Motif 35)

A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A
Reverse Opposite:
C G A T C G T A A C G T A G T C A C G T C G A T A C T G C T G A A C G T A G T C G T C A C G T A A C T G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.2 +/- 16.6bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTRAYMWAGATA--
-TTGACCTANTTATN
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.62
Offset:8
Orientation:forward strand
Alignment:CTTRAYMWAGATA---
--------AGATAASR
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTTRAYMWAGATA-------
---GACAGAGATATCAGTGT
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

GATA5/MA0766.1/Jaspar

Match Rank:4
Score:0.60
Offset:8
Orientation:forward strand
Alignment:CTTRAYMWAGATA---
--------AGATAAGA
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A

GATA3/MA0037.2/Jaspar

Match Rank:5
Score:0.60
Offset:8
Orientation:forward strand
Alignment:CTTRAYMWAGATA---
--------AGATAAGA
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTRAYMWAGATA
--TGACCTARTT-
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTRAYMWAGATA-------
---TATAGAGATAAGAATTG
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTTRAYMWAGATA----------
-TTTTTAGAGATAAGAAATAAAG
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CTTRAYMWAGATA----
------ANAGATAAGAA
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTTRAYMWAGATA---
------NVAGATAAGR
 A G T C A C G T A C G T C T A G C G T A A G C T G T A C C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A