Information for 17-ATATAGGGCCCATCAC (Motif 29)

C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
Reverse Opposite:
A C T G A C G T A C T G G T C A A C G T A C T G C T A G C T A G A G T C G T A C G T A C G C A T C T G A A C G T C G T A A C G T
p-value:1e-9
log p-value:-2.226e+01
Information Content per bp:1.783
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 28.2bp
Average Position of motif in Background22.7 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC
--------CCAATCAA
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.53
Offset:7
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC-
-------GGCCATTAAC
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC
----SCTGTCAVTCAV
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ATATAGGGCCCATCAC--
---TAGTGATCATCATTA
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C A C G T A C G T
A C G T A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC------
-----TCACCCATCAATAAACA
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC
---ACTAGCCAATCA-
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC
------AGCCAATCGG
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC
----NCTGTCAATCAN
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

SRF/MA0083.3/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----ATATAGGGCCCATCAC
TGACCATATATGGTCA-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:ATATAGGGCCCATCAC
-AAATGGACCAATCAG
 C G T A A C G T G T C A A G C T C G T A A C T G C A T G A C T G A G T C A G T C G T A C C G T A A C G T A G T C C G T A G T A C
A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G