Information for 12-GTCCTGWTCC (Motif 25)

C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C
Reverse Opposite:
A C T G A C T G G T C A C G A T G T A C C G T A C T A G A C T G T G C A G A T C
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.795
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif212.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets62.2 +/- 24.8bp
Average Position of motif in Background48.2 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTCCTGWTCC----
GAGCCCTTGTCCCTAA
 A C G T A C G T C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCCTGWTCC-
-TKCTGTTCCA
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T
A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTCCTGWTCC-
---ATAATCCC
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTCCTGWTCC---
---CTGTTCCTGG
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTCCTGWTCC-
----TTTTCCA
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTGWTCC---
TGACCTTTGCCCTA
 A C G T C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTCCTGWTCC
--GCTAATCC
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCCTGWTCC-
--CTTAATCCC
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCCTGWTCC--
--CCTAATCCGC
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T A C G T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTCCTGWTCC----
--NNAYTTCCTGHN
 C T A G A C G T A G T C A G T C C G A T A C T G C G T A A C G T A G T C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T