p-value: | 1e-12 |
log p-value: | -2.775e+01 |
Information Content per bp: | 1.557 |
Number of Target Sequences with motif | 20.0 |
Percentage of Target Sequences with motif | 2.77% |
Number of Background Sequences with motif | 153.3 |
Percentage of Background Sequences with motif | 0.33% |
Average Position of motif in Targets | 50.1 +/- 26.3bp |
Average Position of motif in Background | 44.8 +/- 28.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAGTTCCTAT TTAAGTGCTT-- |
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PH0117.1_Nkx3-1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAGTTCCTAT--- TACTAAGTACTTAAATG |
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PB0115.1_Ehf_2/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AAGTTCCTAT--- TAGTATTTCCGATCTT |
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PH0112.1_Nkx2-3/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAGTTCCTAT-- CNTTAAGTACTTAANG |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGTTCCTAT-- CTGTTGCTAGGS |
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PB0058.1_Sfpi1_1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAGTTCCTAT--- NNACTTCCTCTTNN |
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EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AAGTTCCTAT- -ATTTCCTGTN |
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SPIB/MA0081.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AAGTTCCTAT ---TTCCTCT |
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Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAGTTCCTAT- -ACTTCCTGTT |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AAGTTCCTAT CTGTTCCTGG |
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