Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-56 | -1.292e+02 | 0.0000 | 213.0 | 26.79% | 3717.9 | 7.93% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-54 | -1.252e+02 | 0.0000 | 186.0 | 23.40% | 2941.0 | 6.27% | motif file (matrix) |
svg |
3 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-51 | -1.189e+02 | 0.0000 | 183.0 | 23.02% | 2978.7 | 6.35% | motif file (matrix) |
svg |
4 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-44 | -1.035e+02 | 0.0000 | 163.0 | 20.50% | 2680.4 | 5.71% | motif file (matrix) |
svg |
5 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-42 | -9.838e+01 | 0.0000 | 148.0 | 18.62% | 2328.8 | 4.96% | motif file (matrix) |
svg |
6 |
| GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer | 1e-41 | -9.659e+01 | 0.0000 | 70.0 | 8.81% | 462.1 | 0.99% | motif file (matrix) |
svg |
7 |
| ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-40 | -9.379e+01 | 0.0000 | 65.0 | 8.18% | 400.5 | 0.85% | motif file (matrix) |
svg |
8 |
| GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer | 1e-38 | -8.972e+01 | 0.0000 | 51.0 | 6.42% | 223.7 | 0.48% | motif file (matrix) |
svg |
9 |
| PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer | 1e-36 | -8.298e+01 | 0.0000 | 221.0 | 27.80% | 5333.3 | 11.37% | motif file (matrix) |
svg |
10 |
| GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer | 1e-31 | -7.261e+01 | 0.0000 | 72.0 | 9.06% | 727.8 | 1.55% | motif file (matrix) |
svg |
11 |
| PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer | 1e-31 | -7.149e+01 | 0.0000 | 63.0 | 7.92% | 549.9 | 1.17% | motif file (matrix) |
svg |
12 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-28 | -6.587e+01 | 0.0000 | 128.0 | 16.10% | 2446.7 | 5.22% | motif file (matrix) |
svg |
13 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-26 | -6.102e+01 | 0.0000 | 71.0 | 8.93% | 858.6 | 1.83% | motif file (matrix) |
svg |
14 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-22 | -5.074e+01 | 0.0000 | 113.0 | 14.21% | 2363.3 | 5.04% | motif file (matrix) |
svg |
15 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-19 | -4.439e+01 | 0.0000 | 117.0 | 14.72% | 2718.9 | 5.80% | motif file (matrix) |
svg |
16 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-18 | -4.245e+01 | 0.0000 | 129.0 | 16.23% | 3251.5 | 6.93% | motif file (matrix) |
svg |
17 |
| HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer | 1e-16 | -3.790e+01 | 0.0000 | 112.0 | 14.09% | 2773.0 | 5.91% | motif file (matrix) |
svg |
18 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-16 | -3.759e+01 | 0.0000 | 157.0 | 19.75% | 4630.1 | 9.87% | motif file (matrix) |
svg |
19 |
| AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer | 1e-16 | -3.719e+01 | 0.0000 | 264.0 | 33.21% | 9651.8 | 20.57% | motif file (matrix) |
svg |
20 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-15 | -3.640e+01 | 0.0000 | 69.0 | 8.68% | 1287.9 | 2.75% | motif file (matrix) |
svg |
21 |
| HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer | 1e-14 | -3.245e+01 | 0.0000 | 107.0 | 13.46% | 2805.4 | 5.98% | motif file (matrix) |
svg |
22 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-13 | -3.109e+01 | 0.0000 | 24.0 | 3.02% | 181.9 | 0.39% | motif file (matrix) |
svg |
23 |
| CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer | 1e-12 | -2.921e+01 | 0.0000 | 90.0 | 11.32% | 2277.2 | 4.85% | motif file (matrix) |
svg |
24 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-12 | -2.859e+01 | 0.0000 | 78.0 | 9.81% | 1846.5 | 3.94% | motif file (matrix) |
svg |
25 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-10 | -2.392e+01 | 0.0000 | 159.0 | 20.00% | 5573.8 | 11.88% | motif file (matrix) |
svg |
26 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-9 | -2.217e+01 | 0.0000 | 17.0 | 2.14% | 131.1 | 0.28% | motif file (matrix) |
svg |
27 |
| Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer | 1e-9 | -2.155e+01 | 0.0000 | 69.0 | 8.68% | 1788.4 | 3.81% | motif file (matrix) |
svg |
28 |
| Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer | 1e-8 | -1.891e+01 | 0.0000 | 61.0 | 7.67% | 1592.5 | 3.39% | motif file (matrix) |
svg |
29 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-7 | -1.780e+01 | 0.0000 | 34.0 | 4.28% | 655.8 | 1.40% | motif file (matrix) |
svg |
30 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-4 | -1.094e+01 | 0.0002 | 70.0 | 8.81% | 2441.4 | 5.20% | motif file (matrix) |
svg |
31 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -1.091e+01 | 0.0002 | 16.0 | 2.01% | 265.5 | 0.57% | motif file (matrix) |
svg |
32 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-4 | -1.089e+01 | 0.0002 | 65.0 | 8.18% | 2218.0 | 4.73% | motif file (matrix) |
svg |
33 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-4 | -1.075e+01 | 0.0002 | 30.0 | 3.77% | 751.1 | 1.60% | motif file (matrix) |
svg |
34 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-4 | -1.012e+01 | 0.0004 | 22.0 | 2.77% | 482.6 | 1.03% | motif file (matrix) |
svg |
35 |
| HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer | 1e-4 | -9.910e+00 | 0.0005 | 49.0 | 6.16% | 1575.1 | 3.36% | motif file (matrix) |
svg |
36 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -9.087e+00 | 0.0011 | 36.0 | 4.53% | 1070.9 | 2.28% | motif file (matrix) |
svg |
37 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-3 | -8.779e+00 | 0.0015 | 42.0 | 5.28% | 1344.1 | 2.87% | motif file (matrix) |
svg |
38 |
| ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.365e+00 | 0.0022 | 69.0 | 8.68% | 2614.2 | 5.57% | motif file (matrix) |
svg |
39 |
| Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer | 1e-3 | -8.160e+00 | 0.0027 | 33.0 | 4.15% | 997.3 | 2.13% | motif file (matrix) |
svg |
40 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -7.907e+00 | 0.0033 | 15.0 | 1.89% | 311.4 | 0.66% | motif file (matrix) |
svg |
41 |
| Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer | 1e-3 | -7.324e+00 | 0.0059 | 36.0 | 4.53% | 1178.8 | 2.51% | motif file (matrix) |
svg |
42 |
| Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.099e+00 | 0.0072 | 80.0 | 10.06% | 3284.1 | 7.00% | motif file (matrix) |
svg |
43 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-3 | -7.045e+00 | 0.0074 | 44.0 | 5.53% | 1558.9 | 3.32% | motif file (matrix) |
svg |
44 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-3 | -7.014e+00 | 0.0074 | 91.0 | 11.45% | 3847.9 | 8.20% | motif file (matrix) |
svg |
45 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-3 | -6.968e+00 | 0.0076 | 95.0 | 11.95% | 4056.5 | 8.65% | motif file (matrix) |
svg |
46 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-3 | -6.947e+00 | 0.0076 | 65.0 | 8.18% | 2562.5 | 5.46% | motif file (matrix) |
svg |
47 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-3 | -6.947e+00 | 0.0076 | 36.0 | 4.53% | 1204.6 | 2.57% | motif file (matrix) |
svg |
48 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -6.780e+00 | 0.0086 | 24.0 | 3.02% | 699.9 | 1.49% | motif file (matrix) |
svg |
49 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-2 | -6.647e+00 | 0.0096 | 70.0 | 8.81% | 2840.6 | 6.06% | motif file (matrix) |
svg |
50 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.570e+00 | 0.0102 | 55.0 | 6.92% | 2118.0 | 4.51% | motif file (matrix) |
svg |
51 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -6.211e+00 | 0.0143 | 17.0 | 2.14% | 446.6 | 0.95% | motif file (matrix) |
svg |
52 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-2 | -6.104e+00 | 0.0156 | 42.0 | 5.28% | 1544.2 | 3.29% | motif file (matrix) |
svg |
53 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-2 | -5.930e+00 | 0.0183 | 102.0 | 12.83% | 4564.0 | 9.73% | motif file (matrix) |
svg |
54 |
| Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer | 1e-2 | -5.926e+00 | 0.0183 | 40.0 | 5.03% | 1466.8 | 3.13% | motif file (matrix) |
svg |
55 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.825e+00 | 0.0195 | 13.0 | 1.64% | 310.8 | 0.66% | motif file (matrix) |
svg |
56 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.767e+00 | 0.0203 | 29.0 | 3.65% | 976.1 | 2.08% | motif file (matrix) |
svg |
57 |
| KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer | 1e-2 | -5.685e+00 | 0.0217 | 43.0 | 5.41% | 1629.9 | 3.47% | motif file (matrix) |
svg |
58 |
| GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.580e+00 | 0.0237 | 8.0 | 1.01% | 145.9 | 0.31% | motif file (matrix) |
svg |
59 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -5.469e+00 | 0.0260 | 181.0 | 22.77% | 8898.8 | 18.97% | motif file (matrix) |
svg |
60 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.145e+00 | 0.0354 | 9.0 | 1.13% | 190.3 | 0.41% | motif file (matrix) |
svg |
61 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-2 | -5.120e+00 | 0.0357 | 15.0 | 1.89% | 417.4 | 0.89% | motif file (matrix) |
svg |
62 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-2 | -5.071e+00 | 0.0368 | 52.0 | 6.54% | 2130.4 | 4.54% | motif file (matrix) |
svg |
63 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.068e+00 | 0.0368 | 70.0 | 8.81% | 3037.2 | 6.47% | motif file (matrix) |
svg |
64 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -5.016e+00 | 0.0377 | 9.0 | 1.13% | 194.7 | 0.41% | motif file (matrix) |
svg |
65 |
| ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.003e+00 | 0.0377 | 10.0 | 1.26% | 230.1 | 0.49% | motif file (matrix) |
svg |