Information for 4-TRCTCTGCAAATATTT (Motif 6)

C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
Reverse Opposite:
C G T A C G T A C T G A C G A T C T G A A G C T A G C T A C G T C T A G A G T C C G T A T A C G G C T A T C A G G A T C C G T A
p-value:1e-16
log p-value:-3.760e+01
Information Content per bp:1.667
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif49.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.6 +/- 21.7bp
Average Position of motif in Background46.5 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT-
---NNTNNCAATATTAG
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT-
---NNTNNCAATATTAG
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T A C G T
A C G T A C G T A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TRCTCTGCAAATATTT
---TATGTAAATAT--
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TRCTCTGCAAATATTT
---TATGTAAATAT--
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT
---WAAGTAAAYA---
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT
--------AATTATT-
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT
AACACTGCAATTGTTC
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

Sox11/MA0869.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT
AACACTGAAATTGTT-
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT---
--NNNGGTAATTATNGNGN
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T A C G T A C G T A C G T
A C G T A C G T C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TRCTCTGCAAATATTT
-NCTAAGTAAACA---
 C G A T C T A G A G T C C G A T A T G C G C A T C T A G G A T C T G C A C T G A T C G A A G C T C G T A G A C T C G A T C G A T
A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T A C G T A C G T