Information for 11-GAWCAGAACW (Motif 22)

C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A
Reverse Opposite:
G C A T A T C G G A C T G C A T A T G C G A C T C A T G C G A T G A C T G A T C
p-value:1e-9
log p-value:-2.257e+01
Information Content per bp:1.460
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif374.9
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets47.4 +/- 27.7bp
Average Position of motif in Background50.4 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAWCAGAACW
CCAGGAACAG----
 A C G T A C G T A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAWCAGAACW---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GAWCAGAACW---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GAWCAGAACW-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAWCAGAACW
TGGAACAGMA--
 A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAWCAGAACW
GGAACAAAGR-
 A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAWCAGAACW
ANAGATAAGAA--
 A C G T A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAWCAGAACW---
CAAACAACAACACCT
 A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAWCAGAACW-----
AACACCAAAACAAAGGA
 A C G T A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAWCAGAACW
AAAACAAAGG-
 A C G T C T A G C T G A G C T A G T A C C T G A T A C G C G T A C T G A T A G C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T