Information for 5-TGAGCAAACA (Motif 5)

C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A
Reverse Opposite:
A C G T T A C G C A G T C G A T A C G T T C A G G A T C A G C T T A G C G T C A
p-value:1e-13
log p-value:-3.155e+01
Information Content per bp:1.655
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.48%
Number of Background Sequences with motif821.8
Percentage of Background Sequences with motif1.79%
Average Position of motif in Targets54.9 +/- 24.9bp
Average Position of motif in Background50.8 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----TGAGCAAACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGAGCAAACA
WAAGTAAAYA
 C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGAGCAAACA
AAAGTAAACA
 C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TGAGCAAACA
AAAGTAAACA
 C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCAAACA----
CAAAGTAAACANNNN
 A C G T C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGAGCAAACA--
TATGTAAACANG
 C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXP3/MA0850.1/Jaspar

Match Rank:7
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TGAGCAAACA
---GTAAACA
 C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCAAACA
NCTAAGTAAACA
 A C G T A C G T C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCAAACA---
NCWRWGTAAACANSV
 A C G T A C G T C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TGAGCAAACA
---GTAAACA
 C A G T A T C G T C G A C T A G A G T C T G C A G C T A G T C A A T G C T G C A
A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A