Information for 4-ACCCAATAAA (Motif 4)

C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A
Reverse Opposite:
G C A T C A G T C G A T T G C A G A C T C A G T C A T G C T A G A C T G G A C T
p-value:1e-19
log p-value:-4.430e+01
Information Content per bp:1.665
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.38%
Number of Background Sequences with motif771.6
Percentage of Background Sequences with motif1.68%
Average Position of motif in Targets51.1 +/- 28.8bp
Average Position of motif in Background49.1 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-ACCCAATAAA-----
AACCCAATAAAATTCG
 A C G T C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.89
Offset:2
Orientation:forward strand
Alignment:ACCCAATAAA--
--CCAATAAAAC
 C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T A C G T
A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

HOXA13/MA0650.1/Jaspar

Match Rank:3
Score:0.88
Offset:2
Orientation:forward strand
Alignment:ACCCAATAAA--
--CCAATAAAAA
 C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T A C G T
A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ACCCAATAAA-
-CCYMATAAAA
 C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.85
Offset:2
Orientation:forward strand
Alignment:ACCCAATAAA--
--CCAATAAAAA
 C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T A C G T
A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-ACCCAATAAA-----
CTACCAATAAAATTCT
 A C G T C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.82
Offset:1
Orientation:forward strand
Alignment:ACCCAATAAA-
-NCYAATAAAA
 C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T
A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.79
Offset:2
Orientation:forward strand
Alignment:ACCCAATAAA-
--GCAATAAAA
 C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T
A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--ACCCAATAAA-----
CGACCCAATCAACGGTG
 A C G T A C G T C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ACCCAATAAA-
-NGCAATTAAA
 C T G A T G A C G A T C G T A C G T C A C T G A A C G T G C T A G C T A C G T A A C G T
A C G T T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A