Information for 12-GGGAGGGAGGTCA (Motif 20)

C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T T A C G C G T A G T A C A G T C A C G T A G T C G A T C A G T C A C G T A G T C A G T C G A T C
p-value:1e-7
log p-value:-1.697e+01
Information Content per bp:1.779
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif69.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.2 +/- 21.7bp
Average Position of motif in Background50.5 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGAGGGAGGTCA
GGGCGGGAAGG--
 C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGGGAGGTCA
TGGGGCAAAGGTCA
 A C G T C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGGAGGTCA
GTAGGGCAAAGGTCA
 A C G T A C G T C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAGGGAGGTCA
AGGGGTCAGAGGTCA
 A C G T A C G T C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGGAGGGAGGTCA
-----AGRGGTCA
 C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGAGGGAGGTCA
TAGGGCAAAGGTCA
 A C G T C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGGGAGGTCA
GGGGGGGGGGGGGGA
 A C G T A C G T C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGGAGGGAGGTCA
-----TRAGGTCA
 C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGAGGGAGGTCA
GAGGTCAAAGGTCA
 A C G T C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.60
Offset:7
Orientation:forward strand
Alignment:GGGAGGGAGGTCA
-------AGGTCA
 C A T G A C T G A C T G C G T A A C T G C T A G T A C G T C G A C T A G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A