Information for 8-TGCTGCCAAG (Motif 11)

A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
Reverse Opposite:
A T G C A C G T A C G T A C T G A C T G A G T C C T G A A T C G G T A C C G T A
p-value:1e-9
log p-value:-2.294e+01
Information Content per bp:1.908
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif108.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets53.9 +/- 25.4bp
Average Position of motif in Background56.5 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TGCTGCCAAG-
-GGTGCCAAGT
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:TGCTGCCAAG
--TTGCCAAG
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TGCTGCCAAG
-CGTGCCAAG
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCAAG
---TGCCAA-
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCAAG
-GCTGTCAA-
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGCTGCCAAG-
--ATGCCAACC
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCAAG
-CCTGTCAA-
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCAAG---
---TGCCCAGNHW
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCAAG
-RHTGWCAR-
 A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGCTGCCAAG
GGTGYTGACAGS
 A C G T A C G T A C G T A C T G A T G C A G C T A C T G A G T C A G T C C G T A C G T A T A C G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G